UGENE Forum - How to create a GenBank file?

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How to create a GenBank file? (Read 9426 times)

Jan 12^th, 2013 at 7:26am

Joseph Blackson Offline
YaBB Newbies

Posts: 2

In UGENE, can you create a new sequence file and a new annotation table and merge them into a single GenBank file? (ie instead of having two separate linked files can you create a new GenBank file from scratch)

I want to create genbank files de novo in UGENE but the best I've been able to do so far is File->Create Document from text... and then create a separate gb file which stores all the annotations.

Thanks for any help!

Joe

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Reply #1 - Jan 14^th, 2013 at 7:44pm

Konstantin Okonechnikov Offline
Global Moderator

Posts: 173

Hi Joe,

To merge sequence and annotations into single document select the sequence in ProjectView and call context menu item Export Sequences

After that set output format to Genbank and make sure to check box Export with annotations

Here is the detailed description of Export sequence feature:
http://ugene.unipro.ru/documentation/manual/basic_functions/export_objects/seq_a...

Hope that helps

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Reply #2 - Jan 17^th, 2013 at 5:34am

Joseph Blackson Offline
YaBB Newbies

Posts: 2

Perfect!! Thanks!
Joe

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