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How to create a GenBank file? (Read 9173 times)
Jan 12th, 2013 at 7:26am

Joseph Blackson   Offline
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In UGENE, can you create a new sequence file and a new annotation table and merge them into a single GenBank file? (ie instead of having two separate linked files can you create a new GenBank file from scratch)

I want to create genbank files de novo in UGENE but the best I've been able to do so far is File->Create Document from text... and then create a separate gb file which stores all the annotations.

Thanks for any help!

Joe
 
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Reply #1 - Jan 14th, 2013 at 7:44pm

Konstantin Okonechnikov   Offline
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Hi Joe,

To merge sequence and annotations into single document select the sequence in ProjectView and call context menu item Export Sequences

After that set output format to Genbank and make sure to check box Export with annotations

Here is the detailed description of Export sequence feature:
http://ugene.unipro.ru/documentation/manual/basic_functions/export_objects/seq_a...

Hope that helps Smiley
 
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Reply #2 - Jan 17th, 2013 at 5:34am

Joseph Blackson   Offline
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Perfect!!  Thanks!
Joe
 
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