UGENE Forum - Problem creating a local Blast database

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Problem creating a local Blast database (Read 3253 times)

Oct 16^th, 2016 at 10:39am

Crisant Offline
YaBB Newbies

Posts: 2

Hi, I want to create a local database with a fasta file (53Mb). I couldnt do that: with the starndad BLAST I couldnt select the file (when I selected a red background appeared in the dialog box), with the BLAST+ the red background appeared in the output directory. Please see the attached files. What is the problem? Thanks in advance.

Captura_de_Tela_2016-10-16_a_s_01_36_36.png (78 KB | 382 )

Captura_de_Tela_2016-10-16_a_s_01_37_10.png (66 KB | 378 )

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Reply #1 - Oct 17^th, 2016 at 6:45pm

Olga Golosova Offline
YaBB Administrator

Posts: 338

Hi!

You should select paths without whitespaces - the path to the input FASTA file and the output path. For example, on the screenshot there is a space character in the folder named "Doctorado Te".

Sorry for the inconvenience! This is the original BLAST software limitation, for which we haven't provided a workaround yet.

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Reply #2 - Oct 17^th, 2016 at 7:43pm

Crisant Offline
YaBB Newbies

Posts: 2

Really thanks, I will trye and post the results.
Regards,
Cristian

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