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Raspberry Pi2 and Ugene (Read 8759 times)
Jul 27th, 2015 at 4:34pm

dksamuel   Offline
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Has anyone made ugene work on Raspberry Pi2 (Raspbian 7) Undecided
 
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Reply #1 - Jul 27th, 2015 at 5:32pm

Olga Golosova   Offline
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Not yet  Sad
 
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Reply #2 - Aug 13th, 2015 at 3:20pm

dksamuel   Offline
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I get this error, can you please help, Samuel Cry

src/globals/AppResources.cpp:38:27: fatal error: proc/readproc.h: No such file or directory
compilation terminated.
Makefile.Release:1340: recipe for target '_tmp/obj/release/AppResources.o' failed
make[2]: *** [_tmp/obj/release/AppResources.o] Error 1
make[2]: Leaving directory '/home/pi/Downloads/ugene-1.17.0/src/corelibs/U2Core'
Makefile:46: recipe for target 'release-install' failed
make[1]: *** [release-install] Error 2
make[1]: Leaving directory '/home/pi/Downloads/ugene-1.17.0/src/corelibs/U2Core'
Makefile:263: recipe for target 'sub-src-corelibs-U2Core-install_subtargets-ordered' failed
make: *** [sub-src-corelibs-U2Core-install_subtargets-ordered] Error 2
pi@raspberrypi ~/Downloads/ugene-1.17.0 $
 
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Reply #3 - Sep 1st, 2015 at 6:43pm

Denis Kandrov   Offline
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Hello, Samuel.

As I understand your OS is based on Debian 7. So it is possible to make the following steps:
1. In command shell execute the command:
Code:
$ apt-cache search procps 


You will see something like this:
Quote:
libprocps0 - library for accessing process information from /proc
libprocps0-dev - library for accessing process information from /proc
procps - /proc file system utilities


2. After this you need install development version of procps library:
Code:
sudo apt-get install libprocps0-dev 



Then you can try compile the program again.
I also recommend adding the option UGENE_EXCLUDE_LIST_ENABLED=1 for qmake. This option turns off compiling of plugins for developers.

 
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Reply #4 - Sep 14th, 2015 at 12:28pm

dksamuel   Offline
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Sir I get am error
I_tmp -I../../include -I_tmp/moc/release -I_tmp/ui -o _tmp/obj/release/TreeViewer.o src/ov_phyltree/TreeViewer.cpp
src/ov_phyltree/TreeViewer.cpp: In member function ‘virtual void U2::TreeViewerUI::updateTreeSettings(bool)’:
src/ov_phyltree/TreeViewer.cpp:749:98: error: no matching function for call to ‘qMax(double, qreal)’
src/ov_phyltree/TreeViewer.cpp:749:98: note: candidate is:
/usr/include/qt4/QtCore/qglobal.h:1198:34: note: template<class T> const T& qMax(const T&, const T&)
src/ov_phyltree/TreeViewer.cpp: In member function ‘void U2::TreeViewerUI::updateLegend()’:
src/ov_phyltree/TreeViewer.cpp:910:90: error: no matching function for call to ‘qMax(double, qreal)’
src/ov_phyltree/TreeViewer.cpp:910:90: note: candidate is:
/usr/include/qt4/QtCore/qglobal.h:1198:34: note: template<class T> const T& qMax(const T&, const T&)
src/ov_phyltree/TreeViewer.cpp: In member function ‘void U2::TreeViewerUI::zooming(qreal, qreal)’:
src/ov_phyltree/TreeViewer.cpp:955:113: error: no matching function for call to ‘qMax(qreal, double)’
src/ov_phyltree/TreeViewer.cpp:955:113: note: candidate is:
/usr/include/qt4/QtCore/qglobal.h:1198:34: note: template<class T> const T& qMax(const T&, const T&)
src/ov_phyltree/TreeViewer.cpp:957:114: error: no matching function for call to ‘qMax(qreal, double)’
src/ov_phyltree/TreeViewer.cpp:957:114: note: candidate is:
/usr/include/qt4/QtCore/qglobal.h:1198:34: note: template<class T> const T& qMax(const T&, const T&)
src/ov_phyltree/TreeViewer.cpp: In member function ‘void U2::TreeViewerUI::updateActionsState()’:
src/ov_phyltree/TreeViewer.cpp:1492:134: error: no matching function for call to ‘qMax(qreal, double)’
src/ov_phyltree/TreeViewer.cpp:1492:134: note: candidate is:
/usr/include/qt4/QtCore/qglobal.h:1198:34: note: template<class T> const T& qMax(const T&, const T&)
Makefile.Release:2240: recipe for target '_tmp/obj/release/TreeViewer.o' failed
make[2]: *** [_tmp/obj/release/TreeViewer.o] Error 1
make[2]: Leaving directory '/home/pi/Downloads/ugene-1.18.0-dev/src/corelibs/U2View'
Makefile:46: recipe for target 'release-install' failed
make[1]: *** [release-install] Error 2
make[1]: Leaving directory '/home/pi/Downloads/ugene-1.18.0-dev/src/corelibs/U2View'
Makefile:588: recipe for target 'sub-src-corelibs-U2View-install_subtargets-ordered' failed
make: *** [sub-src-corelibs-U2View-install_subtargets-ordered] Error 2
pi@raspberrypi ~/Downloads/ugene-1.18.0-dev $ ./ugeneui
bash: ./ugeneui: cannot execute binary file

thanks for all your help, Undecided Undecided
 

ugeneerror (0 KB | 407 )
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Reply #5 - Sep 14th, 2015 at 3:31pm

Denis Kandrov   Offline
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Now you see the problem with our source code.  Embarrassed
I’ve created an issue in our tracker to fix this.
 
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Reply #6 - Oct 29th, 2015 at 6:36pm

Olga Golosova   Offline
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Hello, Samuel. The issue should have been solved in the recent UGENE version. You may check it out.
 
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