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  UGENE Forum › General Category › Video Tutorials › UGENE video tutorials #24: SITECON: Searching for TFBS and making TFBS alignments profiles
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UGENE video tutorials #24: SITECON: Searching for TFBS and making TFBS alignments profiles (Read 8862 times)
Jun 29th, 2010 at 7:40pm

Alexey Filippenko   Offline
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UGENE SITECON plugin is a program package for searching for potential transcription factor binding sites. The tool is developed in Institute of Cytology and Genetics SB RAS.

The video shows how to use SITECON to search for TFBS in a DNA sequence and how to create SITECON profiles for future searches.


http://www.youtube.com/watch?v=243r5P_JhH4
« Last Edit: Jun 30th, 2010 at 5:23pm by Alexey Filippenko »  
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Reply #1 - May 9th, 2011 at 5:54pm

Poh   Offline
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Can I put or select more than one profiles to search in 1 go?
 
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Reply #2 - May 17th, 2011 at 8:25pm

Mikhail Fursov   Offline
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Poh wrote on May 9th, 2011 at 5:54pm:
Can I put or select more than one profiles to search in 1 go?


With workflow designer: yes. With sequence view dialog - no.
Please add issue to the tracker if solution in sequence view is also actual.
 
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UGENE team
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Reply #3 - Apr 2nd, 2021 at 11:10am

Bren Bobb   Offline
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The usefulness of this video and significance of it is very overwhelming.
 
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