When I export sequences from a CAP3 alignment as a *.gb file and try to add annotations, I cannot save them directly in the file, only in a separate document (MyDocument.gb by default). Looks like the *.gb file is created without a pre-existing annotation table.

Steps to reproduce the bug:

1) create an alignment of sequence results using CAP3 (I have included a sample *.ace file to this post)
2) select a sequence in the alignment (e.g. assembled contig), then RMB>Export>Save sequence, format Genbank, trim gap characters
3) open the *.gb file in UGENE and try to add an annotation (e.g. through search menu); the only available option is "Create new table" (in a separate file)

Expected: Option Save annotations to ... existing annotation table  should be also available.

I use 64 bit UGENE 1.24.2 from Ubuntu repository.

Thanks a lot! I will try that out.