UGENE Forum - Input port fail to connect

Reply #15 - Feb 23^rd, 2012 at 8:54am

kenkl Offline
Junior Member

Posts: 73

I had deleted the config file in previous version, tried to run on 1579 snapshot but could not. However it could run on 1561 snapshot.

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Reply #16 - Feb 24^th, 2012 at 10:28am

German Offline
Full Member

Posts: 118

It looks like UGENE (ugene or ugeneui or ugenecl) doesn't have the writing permission to the temporary directory:
/tmp/ugene_tmp/

Try to grant them, please.

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Reply #17 - Feb 24^th, 2012 at 11:23am

kenkl Offline
Junior Member

Posts: 73

Hi there, I had granted full rights but still it does not work. See screenshot.

tmp_full_rights.png (89 KB | )

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Reply #18 - Feb 24^th, 2012 at 11:34am

German Offline
Full Member

Posts: 118

I can't reproduce this problem. I would be helpful if you share your files with me:
1) the scheme *.uwl file
2) custom workers *.etc files (~/.config/Unipro/ExternalToolConfig/*)
3) Maybe, some of input files, if their size is not too large.

You could send them to ugene@unipro.ru

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Reply #19 - Feb 27^th, 2012 at 10:42am

kenkl Offline
Junior Member

Posts: 73

Hi German, I'm not sure where does the *.etc file located, kindly advice. Thanks!

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Reply #20 - Feb 27^th, 2012 at 12:14pm

German Offline
Full Member

Posts: 118

kenkl wrote on Feb 27^th, 2012 at 10:42am:

Hi German, I'm not sure where does the *.etc file located, kindly advice. Thanks!

You should enter your home directory ("/home/kenneth/", if you username is "kenneth"). Then follow this path: ".config/Unipro/ExternalToolConfig/". This folder contains your custom element files.

The ".config" filder could be hidden, so you need to show hidden files.

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Reply #21 - Feb 27^th, 2012 at 1:29pm

kenkl Offline
Junior Member

Posts: 73

Here are the *.uwl and *.etc files:

ttuner1.etc (0 KB | )

UGNE_test.uwl (4 KB | )

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Reply #22 - Feb 27^th, 2012 at 1:44pm

kenkl Offline
Junior Member

Posts: 73

Input files are too large to be attached. But you can try using PEH's file for testing, its similar.

http://ugene.unipro.ru/forum/YaBB.pl?num=1326766085/0

Thanks!

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Reply #23 - Feb 27^th, 2012 at 3:02pm

German Offline
Full Member

Posts: 118

kenkl wrote on Feb 27^th, 2012 at 1:44pm:

Input files are too large to be attached. But you can try using PEH's file for testing, its similar.

http://ugene.unipro.ru/forum/YaBB.pl?num=1326766085/0

Thanks!

Kenneth, you files are received. The problem will be investigated asap.

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Reply #24 - Feb 29^th, 2012 at 4:15pm

German Offline
Full Member

Posts: 118

Kenneth, the problem is resolved.
The latest Linux 32-bit snapshot is available now. Other snapshots will be built and available in several time.

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