#!UGENE_WORKFLOW
#
workflow remoteBLAST{
read-sequence {
type:read-sequence;
name:"Read sequence";
merge-gap:10;
mode:0;
}
write-fasta {
type:write-fasta;
name:"Write FASTA";
accumulate:true;
write-mode:2;
}
read-sequence.url->write-fasta.in-sequence.fasta-header
read-sequence.sequence->write-fasta.in-sequence.sequence
.iteration "Default iteration"{
id:11;
read-sequence {
url-in:C:/Users/Hieu/Desktop/Gelacia/sequence/UGENE/GPL3/110216_SN365_A_s_2_1_GPL-3.NoAdapt.fastq;
}
write-fasta {
url-out:C:/Users/Hieu/Desktop/Gelacia/sequence/UGENE/GPL3/GPL3.fa;
write-mode:0;
}
}
.meta {
visual {
read-sequence {
description:" Read sequence
Reads sequence(s) from 110216_SN365_A_s_2_1_GPL-3.NoAdapt.fastq.
";
tooltip:"Reads sequences and annotations if any from local or remote files.";
pos:"-705 -510";
style:ext;
bg-color-ext:"0 128 128 64";
out-sequence.angle:360;
}
write-fasta {
description:" Write FASTA
Writes sequence(s) from Read sequence in FASTA format to GPL3.fa.
";
tooltip:"Writes all supplied sequences to file(s) in FASTA format.";
pos:"-525 -510";
style:ext;
bg-color-ext:"0 128 128 64";
in-sequence.angle:180;
}
read-sequence.out-sequence->write-fasta.in-sequence {
text-pos:"-27.5 -24";
}
}
}
}