#!/bin/bash          

echo 'You need root privileges.'

echo 'Extracting the icons to "/usr/share/icons":'
sudo tar -xvzf icons.tar.gz -C /usr/share/icons

echo 'Creating the MIME types (copy ugene.xml to /usr/share/mime/packages):'
sudo cp ugene.xml /usr/share/mime/packages/ugene.xml

echo 'Updating new MIME types.'
sudo update-mime-database /usr/share/mime

echo 'Associating UGENE to the new MIME types:'
echo 'application/x-ugene-uwl=ugene.desktop' | sudo tee -a /etc/gnome/defaults.list
echo 'application/x-ugene-uql=ugene.desktop' | sudo tee -a /etc/gnome/defaults.list
echo 'application/x-ugene-gb=ugene.desktop' | sudo tee -a /etc/gnome/defaults.list
echo 'application/x-ugene-fa=ugene.desktop' | sudo tee -a /etc/gnome/defaults.list
echo 'application/x-ugene-aln=ugene.desktop' | sudo tee -a /etc/gnome/defaults.list
echo 'application/x-ugene-uprj=ugene.desktop' | sudo tee -a /etc/gnome/defaults.list

echo 'Adding the mime types to the ugene.desktop file.'
echo 'MimeType=application/x-ugene-uprj;application/x-ugene-aln;application/x-ugene-fa;application/x-ugene-gb;application/x-ugene-uql;application/x-ugene-uwl;' | sudo tee -a /usr/share/applications/ugene.desktop

echo 'Done. This terminal will be closed in 10 seconds.'

sleep 10
exit 0