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https://forum.ugene.net/forum/YaBB.pl General Category >> Help and How-to >> How can I insert a fie with some sequences to alignament? https://forum.ugene.net/forum/YaBB.pl?num=1259091467 Message started by Bruno Fantinatti on Nov 25^th, 2009 at 2:37am

Title: How can I insert a fie with some sequences to alignament?
Post by Bruno Fantinatti on Nov 25^th, 2009 at 2:37am

Hi,
I need to make a alignament of some sequences. But I don't know to insert the sequences to Ugene to work them. First I need to create a special file type and after insert it?
I had try with a normal fasta file wich have many sequences included, but no results... I think I'm doing some thing wrong...

Title: Re: How can I insert a fie with some sequences to alignament?
Post by Ivan Efremov on Nov 25^th, 2009 at 2:04pm

Hi Bruno,
your question is a quite common issue, we will try to make alignment of multiple FASTA sequences more convenient in future versions.
For now, you have to do the following:

1) Open your FASTA file and export all needed sequences into alignment file - CLUSTAL (see export_to_ma.png).

2) Open exported .aln file and align it using MUSCLE (see align_exported.png)

export_to_ma_001.png (27 KB | )

align_exported_001.png (25 KB | )