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Align in amino form task failed. (Read 3902 times)
Jun 16th, 2012 at 4:53pm

Allis   Offline
YaBB Newbies

Posts: 1
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Whenever I try to align multiple sequences using MUSCLE or Kalign and choose the option "Translate to amino when aligning" I receve the following error message:

Code:
'Align in amino form' task failed: Subtask {TranslateMSA2AminoTask} is failed:
Unable to find suitable translation for Multiple alignment 


In the Sequence view translation table for all the sequences is the same. And I've found no way to select a translation table in the Alignment view.

CPU: AMD Athlon(tm) II X2 270
OS: Ubuntu 12.04 i386
Ugene is from ppa: 1.11.0
 
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Reply #1 - Jun 17th, 2012 at 11:20pm

Konstantin Okonechnikov   Offline
Global Moderator

Posts: 173
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hi! The issue will be fixed in next minor release 1.11.1:
https://ugene.unipro.ru/tracker/browse/UGENE-1044

Meanwhile, workaround will be to export alignment to amino manually (context menu item Export->Amino translation of alignment rows...), then perform alignment.
 
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