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Importing and exporting annotation in gff3 files (Read 12701 times)
Jan 17th, 2011 at 11:40am

Poh   Offline
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Hi! I can see that most of the files that ugene use for annotation is gb format. Is it possible for annotation to be stored as gff3 format?
 
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Reply #1 - Jan 18th, 2011 at 7:34pm

Konstantin Okonechnikov   Offline
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GFF import is supported. Open GFF file and "drag" annotations from Project View to corresponding sequence object.
Export to GFF is not supported yet, work is in progress.
 
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Reply #2 - Jan 19th, 2011 at 9:51am

Poh   Offline
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Konstantin Okonechnikov wrote on Jan 18th, 2011 at 7:34pm:
GFF import is supported. Open GFF file and "drag" annotations from Project View to corresponding sequence object.
Export to GFF is not supported yet, work is in progress.


OK. Having gff3 would be great. It would be better that result from ugene could be exported to chado database and view in gbrowse.
 
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