General Category >> Bugs and Issues >> Problem with SPAdes assembly

Message started by Jesus on Nov 2nd, 2023 at 7:52pm

Title: Problem with SPAdes assembly
Post by Jesus on Nov 2nd, 2023 at 7:52pm
Hi, I am trying to assemble two .fq files obtained with illumina paired ends. This files already have been used to assemble contigs using Shovill of Galaxy, however, when I try to run an assembly with UGene, the pipe stops with the message "Subtask {GenomeAssemblyTask} is failed: Subtask {SPAdes tool} is failed: SPAdes tool exited with code 245". Can you give any advice, please?

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