Hello,
I use a workflow to extract ORF from a multifasta file:
Read Sequence-> ORF Marker ->Write Annotation (in CSV).
It works fine but I need the GenID indicating the origin of each extracted ORF.
Myabe Dump sequence info could help me but it is not cooperative (no parameters)
thanks for the help
Antoine

Just to precise,
in the element Write Annotation, with CSV format, I have selected TRUE for the option Write Sequence names,.

I found myself the solution...
By changing in the element ORF marker, the parameter "Annotate as" (by default ORF). I choice user script and by analogy with the sample Dump add

Code:

out_text=getName(sequence);

I have my GenID on group and name but is useful!
Thanks

Hi ANTOINE! You're a guru of the Workflow Designer!!  :)

However, there is indeed an error in the "Wrtie Annotations" element. The "Write sequence names" parameter is not taken into account. I've created an issue, we'll fix it until 1.30.

thanks,
but it's my first use of a script with the workflow. (just a padawan)
Thanks to the Custom Element of the samples where I can see script examples. (I am a not coding people).
Is it possible to see a script of a existing element to have a base to create a new element?
Antoine

Quote:

Is it possible to see a script of a existing element to have a base to create a new element?

You can select the "Edit script of the element" item in the "Actions" menu to open a dialog with the script.