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https://forum.ugene.net/forum/YaBB.pl General Category >> Help and How-to >> Cuffdiff error https://forum.ugene.net/forum/YaBB.pl?num=1429122223 Message started by mpa2 on Apr 16^th, 2015 at 1:23am

Title: Cuffdiff error
Post by mpa2 on Apr 16^th, 2015 at 1:23am

Dear all,

I got this error when running RNA seq Tuxedo workflow.

Subtask {Cuffdiff tool} is failed: Cuffdiff tool exited with code 1

Does anybody know why is the cause?

Thanks

Title: Re: Cuffdiff error
Post by Olga Golosova on Apr 20^th, 2015 at 3:46pm

Hello, mpa2!

Could you please try to reproduce the issue?

If the issue can be reproduced, it would be helpful if you could:
1) Check the Details log level in the UGENE Application Settings.
2) Copy UGENE log and send it yo us.
3) If it is possible, please also send us the input data.

Title: Re: Cuffdiff error
Post by mpa2 on Apr 21^st, 2015 at 5:39pm

Hello Olga,

I am sorry, I couldn't reproduce the issue.
Next time I ran the same samples, it worked well!

Regards
mpa2

Title: Re: Cuffdiff error
Post by Olga Golosova on Apr 22^nd, 2015 at 3:01pm

OK, thanks for checking!
Olga