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https://forum.ugene.net/forum/YaBB.pl General Category >> Help and How-to >> Repeats finder annotations export https://forum.ugene.net/forum/YaBB.pl?num=1378910084 Message started by TeoB84 on Sep 11^th, 2013 at 9:34pm

Title: Repeats finder annotations export
Post by TeoB84 on Sep 11^th, 2013 at 9:34pm

Hi!

I've just exported a repeats finder annotation in .csv format. In the report there is no info about the position of the mate pattern.
The repeat distance is shown, but is impossible to retrieve if the mate repeat is at 3' or 5' compared to the entry repeat.

How can i export the coordinates of both repeats pairs?
Thanks in advance

Matteo

Title: Re: Repeats finder annotations export
Post by Yuriy Vaskin on Sep 12^th, 2013 at 2:52pm

Matteo, thank you for the question.

One repeat_unit goes to the .csv file in two lines. Try to export only one repeat_unit to the file to clearly see what I mean.