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General Category >> Feature Requests >> extra option to view the alignments
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Message started by Nex on Nov 11th, 2012 at 1:03am

Title: extra option to view the alignments
Post by Nex on Nov 11th, 2012 at 1:03am
Dear Ugene,

Although this is a minor thing, I really like it. I have been using Bioedit for quite a while, and I very much like an option that it has to represent matches as dots in alignments. Unmatched nucleotides or aminoacids show the actual letters, so it's really easy to spot where the changes are.

A second thing would to have an option to search for mismatches (if it is not already there, I have not used the software for long enough to find it), so you can see whether two or more sequences are identical or not at a glance.

Thanks!

Title: Re: extra option to view the alignments
Post by Yuriy Vaskin on Nov 12th, 2012 at 12:17pm
Thanks for your suggestions!

We've planned both features:
https://ugene.unipro.ru/tracker/browse/UGENE-943
https://ugene.unipro.ru/tracker/browse/UGENE-1128

They'll be implemented in the coming versions of UGENE.
I'll extend descriptions with your comments.

Title: Re: extra option to view the alignments
Post by Kirill Rasputin on Oct 16th, 2013 at 5:08pm
Hello!
Listed features already implemented in UGENE.

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