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General Category >> Bugs and Issues >> cloning tool improperly marks types of fragment ends
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Message started by Anthony on Nov 10th, 2012 at 2:21am

Title: cloning tool improperly marks types of fragment ends
Post by Anthony on Nov 10th, 2012 at 2:21am
Hello,

I am running the Windows 7 64 bit version 1.11.3. After digesting the provided plasmid sequence with BamHI and AgeI using the cloning tool, I then went back into the cloning tool to ligate it to another molecule. The 3' end of the large fragment is blunt, when it should not be because it was cut with BamHI. It is interesting though because the 5' end of the other fragment has the proper overhang int the cloning window


Sincerely,
Anthony Bishop
https://forum.ugene.net/forum/YaBB.pl?action=downloadfile;file=pPD95_75_001.gb (51 KB | )

Title: Re: cloning tool improperly marks types of fragment ends
Post by Konstantin Okonechnikov on Nov 11th, 2012 at 11:53pm
Hi Anthony,

thanks for bug report, the issue is fixed:
https://ugene.unipro.ru/tracker/browse/UGENE-1279

The fix will be included in 1.11.4.

In a couple of days (regular weekly build) it will be also available via development snapshot:
http://ugene.unipro.ru/snapshot.html

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