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https://forum.ugene.net/forum/YaBB.pl General Category >> Bugs and Issues >> Problem: Sequences have different alphabets https://forum.ugene.net/forum/YaBB.pl?num=1317191862 Message started by Fondells on Sep 28^th, 2011 at 1:37pm

Title: Problem: Sequences have different alphabets
Post by Fondells on Sep 28^th, 2011 at 1:37pm

Hi,

thank you for this great editor.

I wish to align app. 30000 sequences using muscle 4.0 algorithm integrated into the ugene editor. I got the error message "Sequences have different alphabets" after clicking on export to Clustal.

Do you have any advice for me?

Thanks.

Title: Re: Problem: Sequences have different alphabets
Post by Mikhail Fursov on Sep 29^th, 2011 at 1:19pm

Probably your data-set has mixed amino/dna sequence.
Could you please share it with us, so we can investigate the issue?