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https://forum.ugene.net/forum/YaBB.pl General Category >> Video Tutorials >> UGENE video tutorial #1: Making a multiple sequence alignment from FASTA file https://forum.ugene.net/forum/YaBB.pl?num=1265720091 Message started by Alexey Filippenko on Feb 9^th, 2010 at 7:54pm

Title: UGENE video tutorial #1: Making a multiple sequence alignment from FASTA file
Post by Alexey Filippenko on Feb 9^th, 2010 at 7:54pm

In this episode you'll learn the basic stuff of working with FASTA sequence containers and making multiple sequence alignments.

[media width=720]http://www.youtube.com/watch?v=2pZszPGKnT8[/media]

Title: Re: UGENE video tutorial #1: Making a multiple sequence alignment from FASTA file
Post by Poh on Jan 9^th, 2011 at 1:47pm

I do not think it performs clustalw multiple sequence alignment but just write *fasta to *aln. Or did it?

Title: Re: UGENE video tutorial #1: Making a multiple sequence alignment from FASTA file
Post by Ivan Efremov on Jan 10^th, 2011 at 2:37am

Hi Poh,

you are correct - this video is about saving sequences from FASTA as multiple alignment file.

Integrated algorithms/tools (e.g. MUSCLE, Clustal) are used to perform the alignment of the resulted data.